Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888667.1_cds_XP_016443289.1_38464
CDS Infomation

[gene=LOC107768661] [db_xref=GeneID:107768661] [protein=copper-transporting ATPase RAN1-like isoform X5] [protein_id=XP_016443289.1] [location=join(56568..57062,57345..57774,57881..57963,58224..58466,59031..59089,59194..59536,60216..60410,60517..60774,61164..61640)] [gbkey=CDS]
Sequence

ATGACATGTGCAGCTTGTGTAAATTCTGTTGAAGGTATCCTAAAACAGCTCCCAGGTGTA
CGAAAGGCCGTAGTTGCTTTGGCTACATCGCTAGGAGAGGTTGGATATGATCCGTCCATA
ATCAGTAAGGATGATATAGCGAATGCAATTGAAGATGCTGGTTTTGAAGCTTCCTTTGTG
CAGAGCAGCGAGCAGGATAAAATTGTACTTGGGGTGGTTGGTATTTCTGGTGAGATGGAT
GCACAGTTGTTAGAAGGCATTCTTTCAAAGTTGCATGGAGTTAAACACTTTTTATTTGAT
CGGGTATCAAGTGAGCTTGAAGTTGTCTTTGATCCCGAAGTTCTTGGCTCAAGATCTGTA
GTTGATGGCGTTGAAGGAGGAAGCAGTGGCAAGTTTAAGTTACTTGTCAAGAACCCGTAT
ACAAGAATGGCTTCCAGAGATTTAGAAGAATCCTCGAAGATGTTTCGGCTTTTTACAGCA
AGCTTATCTCTAAGTGTTCCTGTGATTCTAATGCGTGTCGTCTGCCCTCAAATACCTCTG
CTCTATGCTTTACTGATTTGGCAGTGTGGTCCCTTTCAAATGGGTGATTGGTTAAAGTGG
GCTTTAGTGACTGTTGTCCAATTTGGTATTGGTAAACGTTTTTATGTTGCGGCTGGAAGA
GCACTTCGAAATGGTTCCACAAACATGGATGTCTTGGTTGCGTTGGGAACTACAGCTTCC
TATGTTTACTCTGTATGTGCACTACTTTATGGTGCAATTTCTGGGTTCTGGTCTCCAACT
TACTTTGAAACAAGTGCCATGTTAATCACATTTGTACTTCTAGGAAAGTACTTGGAAACT
CTTGCTAAAGGAAAGACATCTGGTGCTATCAAAAAACTCGTAGAACTCGCTCCCGCTACA
GCTATACTGCTTGTCAAAGACAAAGGTGGAAAAGTAGTTGGAGAAAGAGAAATAGATGCT
TTATTGATTCAGGCTGGTGATATATTAAAAGTACTTCCTGGTACAAAAGTTCCTGTGGAT
GGTGTCGTTGTATGGGGTTCAAGCCATGTGAATGAGAGTATGGTCACTGGAGAATCTGCT
CCTGTTTTGAAAGAGATTAATTCAGTGGTTATTGGAGGTACAATCAATTTACATGGTTCT
CTTCACATACAGGCCACAAAAGTAGGGTCAAACACAGTTCTGAGTCAGATCATATCTCTG
GTTGAGACAGCACAGATGTCAAAGGCTCCCATTCAGAAGTTCGCCGACTATATTGCAAGC
ATTTTTGTTCCTGTGGTTATTACTATGTCCTTATTGACATTCTTTGGATGGTATGTTGCT
GGAGTTCTTGGAGGCTATCCAGAAGAATGGCTGCCAGAAAATGGCAATTATTTTGTATTT
TCTTTGATGTTTGCGATATCAGTTGTGGTTATTGCATGTCCTTGTGCACTTGGTTTGGCC
ACCCCCACTGCTGTTATGGTTGCGACAGGGGTTGGTGCCAACAACGGTGTGCTGATAAAG
GGAGGAGATGCATTGGAGATGGCGCAGAAGATTAGATATGTGATATTTGATAAGACAGGC
ACTTTGACCCAGGGAAAAGCTAAAGTCACAACAGCCAAAGTTTTCACTGAGATGGATCGT
GGAGAATTCCTAACTTTGGTAGCTTCCGCAGAGGCAAGCAGTGAACACCCGTTGGCTAAA
GCCATAATGGAATACGCTCGTCATTTTCATTTCTTTGATGAACCATCTGATACCGATCAG
AGTTACAGTGAACAGGCCAAGTTTTCTGGATGGCTTCAAGATGTATCAGATTTCTCTGTT
TTGCCTGGAAAAGGTATACAGTGCTCCGTCGATGGGAAATGGGTTTTGATTGGTAACCGC
AAGCTGCTTACTGAAAATGGGATAGCTATACCTTCCAACGTAGAGAATTTTGTTGTTGAG
TTGGAAGAAAGTGCAAAGACAGGCATTCTTGTCGCTCGAGATAATGTTGTAATTGGTGCT
CTGGGGATAGCTGACCCACTAAAGAGAGAAGCAGCTGTTGTTGTAGAGGGCCTTATAAAA
ATGGGCGTCCAACCAATCATGGTTACTGGTGATAATTGGAGAACAGCTCGTGCAGTTGCT
AAGGAGGTTGGTATCCAGGATGTTAGAGCAGAAGTGTTGCCAGCAGGAAAAGCCGAGGTC
ATCCGTTCATTTCAAAAGGGAGGCAGTGTAGTTGCTATGGTAGGTGATGGGATCAACGAC
TCACCCGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCGGGAACTGATATTGCG
ATAGAAGCTGCTGAGTACGTGTTAATGAGGAGCAACTTGGAGGATGTCATCACTGCCATA
GACCTCTCAAGGAAGACATTTGCACGGATTAGGTGGAATTATATCTTTGCCATGGCGTAC
AATGTGATCGCAATTCCAGTGGCTGCAGGGGCTCTTTTTCCTTTGTTAAGACTGGAGTTG
CCACCTTGGGTAGCTGGTGCATGCATGGCAATGTCATCTGTAAGTGTTGTGTGTTCTTCT
CTGTATCTAAAGAGATACAAGAAACCCAGACTTACCACTATATTGGAAATAACTATAGAG
TAG

Peptide Sequence

PEP ID

XP_016443289.1
PEP Infomation

PREDICTED: copper-transporting ATPase RAN1-like isoform X5 [Nicotiana tabacum]
Sequence

MTCAACVNSVEGILKQLPGVRKAVVALATSLGEVGYDPSIISKDDIANAIEDAGFEASFV
QSSEQDKIVLGVVGISGEMDAQLLEGILSKLHGVKHFLFDRVSSELEVVFDPEVLGSRSV
VDGVEGGSSGKFKLLVKNPYTRMASRDLEESSKMFRLFTASLSLSVPVILMRVVCPQIPL
LYALLIWQCGPFQMGDWLKWALVTVVQFGIGKRFYVAAGRALRNGSTNMDVLVALGTTAS
YVYSVCALLYGAISGFWSPTYFETSAMLITFVLLGKYLETLAKGKTSGAIKKLVELAPAT
AILLVKDKGGKVVGEREIDALLIQAGDILKVLPGTKVPVDGVVVWGSSHVNESMVTGESA
PVLKEINSVVIGGTINLHGSLHIQATKVGSNTVLSQIISLVETAQMSKAPIQKFADYIAS
IFVPVVITMSLLTFFGWYVAGVLGGYPEEWLPENGNYFVFSLMFAISVVVIACPCALGLA
TPTAVMVATGVGANNGVLIKGGDALEMAQKIRYVIFDKTGTLTQGKAKVTTAKVFTEMDR
GEFLTLVASAEASSEHPLAKAIMEYARHFHFFDEPSDTDQSYSEQAKFSGWLQDVSDFSV
LPGKGIQCSVDGKWVLIGNRKLLTENGIAIPSNVENFVVELEESAKTGILVARDNVVIGA
LGIADPLKREAAVVVEGLIKMGVQPIMVTGDNWRTARAVAKEVGIQDVRAEVLPAGKAEV
IRSFQKGGSVVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAAEYVLMRSNLEDVITAI
DLSRKTFARIRWNYIFAMAYNVIAIPVAAGALFPLLRLELPPWVAGACMAMSSVSVVCSS
LYLKRYKKPRLTTILEITIE

Transcript Sequence

Gene sequence data has not been registered.